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1

Plasma phospholipids identify antecedent memory impairment in older adults

Mapstone, Mark, Cheema, Amrita K, Fiandaca, Massimo S, Zhong, Xiaogang, Mhyre, Timothy R, MacArthur, Linda H, Hall, William J, Fisher, Susan G, Peterson, Derick R, Haley, James M, Nazar, Michael D, Ri

Journal:

Nature Medicine

Year:

2014

Language:

english

File:

PDF, 521 KB

english, 2014

2

When Your 35-Year-Old Patient has a Sternotomy Scar

Cheema, Amrita, Ibekwe, Stephanie, Nyhan, Daniel, Steppan, Jochen

Journal:

International Anesthesiology Clinics

Year:

2018

Language:

english

File:

PDF, 183 KB

english, 2018

3

Effects of ionizing radiation on the heart

Boerma, Marjan, Sridharan, Vijayalakshmi, Mao, Xiao-Wen, Nelson, Gregory A., Cheema, Amrita K., Koturbash, Igor, Singh, Sharda P., Tackett, Alan J., Hauer-Jensen, Martin

Journal:

Mutation Research/Reviews in Mutation Research

Year:

2016

Language:

english

File:

PDF, 540 KB

english, 2016

4

Gene-metabolite profile integration to understand the cause of spaceflight induced immunodeficiency

Chakraborty, Nabarun, Cheema, Amrita, Gautam, Aarti, Donohue, Duncan, Hoke, Allison, Conley, Carolynn, Jett, Marti, Hammamieh, Rasha

Journal:

npj Microgravity

Year:

2018

Language:

english

File:

PDF, 977 KB

english, 2018

5

TREATMENT WITH TETRAHYDROBIOPTERIN ACCELERATES WHITE MATTER MATURATION IN A MOUSE MODEL OF PRENATAL HYPOXIA SIMULATING CONGENITAL HEART DISEASE

Romanowicz, Jennifer, Korotcova, Ludmila, Ramachandra, Shruti D., Morton, Paul D., Cheema, Amrita, Gallo, Vittorio, Jonas, Richard A., Ishibashi, Nobuyuki

Journal:

Journal of the American College of Cardiology

Year:

2018

Language:

english

File:

PDF, 297 KB

english, 2018

6

Metabolomic studies in tissues of mice treated with amifostine and exposed to gamma-radiation

Cheema, Amrita K., Li, Yaoxiang, Girgis, Michael, Jayatilake, Meth, Simas, Madison, Wise, Stephen Y., Olabisi, Ayodele O., Seed, Thomas M., Singh, Vijay K.

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 4.47 MB

english, 2019

7

Proteomic profiles for Alzheimer's disease and mild cognitive impairment among adults with Down syndrome spanning serum and plasma: An Alzheimer's Biomarker ConsortiumâDown Syndrome (ABCâDS) study

Petersen, Melissa E., Zhang, Fan, Schupf, Nicole, KrinskyâMcHale, Sharon J., Hall, James, Mapstone, Mark, Cheema, Amrita, Silverman, Wayne, Lott, Ira, Rafii, Michael S., Handen, Benjamin, Klunk, Wil

Journal:

Alzheimer s & Dementia Diagnosis Assessment & Disease Monitoring

Year:

2020

File:

PDF, 606 KB

2020

8

Functional mimicry of the acetylated C-terminal tail of p53 by a SUMO-1 acetylated domain, SAD

Amrita Cheema, Chad D. Knights, Mahadev Rao, Jason Catania, Ricardo Perez, Brigitte Simons, Sivanesan Dakshanamurthy, Vamsi K. Kolukula, Maddalena Tilli, Priscilla A. Furth, Christopher Albanese, Mari

Journal:

Journal of Cellular Physiology

Year:

2010

Language:

english

File:

PDF, 626 KB

english, 2010

9

Detection of the acrolein-derived cyclic DNA adduct by a quantitative 32P-postlabeling/solid-phase extraction/HPLC method: Blocking its artifact formation with glutathione

Armaghan Emami, Marcin Dyba, Amrita K. Cheema, Jishen Pan, Raghu G. Nath, Fung-Lung Chung

Journal:

Analytical Biochemistry

Year:

2008

Language:

english

File:

PDF, 469 KB

english, 2008

10

A new method for alignment of LC-MALDI-TOF data

Zhiqun Tang, Lihua Zhang, Amrita K Cheema, Habtom W Ressom

Journal:

Proteome Science

Year:

2011

Language:

english

File:

PDF, 384 KB

english, 2011

11

Evidence of complete cellular repair of 1,N6-ethenoadenine, a mutagenic and potential damage for human cancer, revealed by a novel method

Sujata Choudhury, Sanjay Adhikari, Amrita Cheema, Rabindra Roy

Journal:

Molecular and Cellular Biochemistry

Year:

2008

Language:

english

File:

PDF, 564 KB

english, 2008

12

Metabolomic profiling for biomarker discovery in pancreatic cancer

Prabhjit Kaur, Kathryn Sheikh, Alexander Kirilyuk, Ksenia Kirilyuk, Rajbir Singh, Habtom W. Ressom, Amrita K. Cheema

Journal:

International Journal of Mass Spectrometry

Year:

2012

Language:

english

File:

PDF, 1.17 MB

english, 2012

13

Using a spike-in experiment to evaluate analysis of LC-MS data

Leepika Tuli, Tsung-Heng Tsai, Rency S Varghese, Jun Feng Xiao, Amrita Cheema, Habtom W Ressom

Journal:

Proteome Science

Year:

2012

Language:

english

File:

PDF, 351 KB

english, 2012

14

Utilization of metabolomics to identify serum biomarkers for hepatocellular carcinoma in patients with liver cirrhosis

Habtom W. Ressom, Jun Feng Xiao, Leepika Tuli, Rency S. Varghese, Bin Zhou, Tsung-Heng Tsai, Mohammad R. Nezami Ranjbar, Yi Zhao, Jinlian Wang, Cristina Di Poto, Amrita K. Cheema, Mahlet G. Tadesse, R

Journal:

Analytica Chimica Acta

Year:

2012

Language:

english

File:

PDF, 1.02 MB

english, 2012

15

Feasibility of Identifying the Tobacco-related Global Metabolome in Blood by UPLC–QTOF-MS

Hsu, Ping-Ching, Zhou, Bin, Zhao, Yi, Ressom, Habtom W., Cheema, Amrita K., Pickworth, Wallace, Shields, Peter G.

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 1.51 MB

english, 2013

16

Analysis of LC−MS Data for Characterizing the Metabolic Changes in Response to Radiation

Varghese, Rency S., Cheema, Amrita, Cheema, Prabhdeep, Bourbeau, Marc, Tuli, Leepika, Zhou, Bin, Jung, Mira, Dritschilo, Anatoly, Ressom, Habtom W.

Journal:

Journal of Proteome Research

Year:

2010

Language:

english

File:

PDF, 468 KB

english, 2010

17

LC–MS Based Serum Metabolomics for Identification of Hepatocellular Carcinoma Biomarkers in Egyptian Cohort

Xiao, Jun Feng, Varghese, Rency S., Zhou, Bin, Nezami Ranjbar, Mohammad R., Zhao, Yi, Tsai, Tsung-Heng, Di Poto, Cristina, Wang, Jinlian, Goerlitz, David, Luo, Yue, Cheema, Amrita K., Sarhan, Naglaa,

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 1.80 MB

english, 2012

18

iTRAQ-Based Quantitative Protein Expression Profiling and MRM Verification of Markers in Type 2 Diabetes

Kaur, Prabhjit, Rizk, Nasser M., Ibrahim, Sereen, Younes, Noura, Uppal, Arushi, Dennis, Kevin, Karve, Tejaswita, Blakeslee, Kenneth, Kwagyan, John, Zirie, Mahmoud, Ressom, Habtom W., Cheema, Amrita K.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 2.71 MB

english, 2012

19

Biomarkers in the Age of Omics: Time for a Systems Biology Approach

Abu-Asab, Mones S., Chaouchi, Mohamed, Alesci, Salvatore, Galli, Susana, Laassri, Majid, Cheema, Amrita K., Atouf, Fouad, VanMeter, John, Amri, Hakima

Journal:

Omics A Journal of Integrative Biology

Year:

2011

Language:

english

File:

PDF, 370 KB

english, 2011

20

The critical need for defining preclinical biomarkers in Alzheimer's disease

Fiandaca, Massimo S., Mapstone, Mark E., Cheema, Amrita K., Federoff, Howard J.

Journal:

Alzheimer's & Dementia

Year:

2014

Language:

english

File:

PDF, 862 KB

english, 2014

21

Addition of metabolomics to the omics spectrum for cancer biomarker development– demonstration with the KrasG12D mouse model for pancreatic carcinoma

Laiakis, Evagelia C, LaConti, Joseph J, Cheema, Amrita, Wellstein, Anton, Fornace, Albert J

Journal:

Year:

2014

Language:

english

File:

PDF, 65 KB

english, 2014

22

Correction to iTRAQ-based Quantitative Protein Expression Profiling and MRM Verification of Markers in Type 2 Diabetes

Kaur, Prabhjit, Rizk, Nasser M., Ibrahim, Sereen, Younes, Noura, Uppal, Arushi, Dennis, Kevin, Karve, Tejaswita, Blakeslee, Kenneth, Kwagyan, John, Zirie, Mahmoud, Ressom, Habtom W., Cheema, Amrita K.

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 117 KB

english, 2013

23

[IEEE 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW) - HongKong, China (2010.12.18-2010.12.18)] 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW) - Using a spike-in experiment to evaluate analysis of LC-MS data

Tuli, Leepika, Tsai, Tsung-Heng, Varghese, Rency S., Cheema, Amrita, Ressom, Habtom W.

Year:

2010

Language:

english

File:

PDF, 676 KB

english, 2010

24

Integrated Analysis of ATM Mediated Gene and Protein Expression Impacting Cellular Metabolism

Cheema, Amrita K., Timofeeva, Olga, Varghese, Rency, Dimtchev, Alexandre, Shiekh, Kathryn, Shulaev, Vladimir, Suy, Simeng, Collins, Sean, Ressom, Habtom, Jung, Mira, Dritschilo, Anatoly

Journal:

Journal of Proteome Research

Year:

2011

Language:

english

File:

PDF, 3.53 MB

english, 2011

25

Liver Metabolomics Reveals Increased Oxidative Stress and Fibrogenic Potential in Gfrp Transgenic Mice in Response to Ionizing Radiation

Cheema, Amrita K, Pathak, Rupak, Zandkarimi, Fereshteh, Kaur, Prabhjit, Alkhalil, Lynn, Singh, Rajbir, Zhong, Xiaogang, Ghosh, Sanchita, Aykin-Burns, Nukhet, Hauer-Jensen, Martin

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 2.21 MB

english, 2014

26

Metabolomic changes in gastrointestinal tissues after whole body radiation in a murine model

Ghosh, Sanchita P., Singh, Rajbir, Chakraborty, Kushal, Kulkarni, Shilpa, Uppal, Arushi, Luo, Yue, Kaur, Prabhjit, Pathak, Rupak, Kumar, K. Sree, Hauer-Jensen, Martin, Cheema, Amrita K.

Journal:

Molecular BioSystems

Year:

2013

Language:

english

File:

PDF, 2.23 MB

english, 2013

27

[IEEE 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Hong Kong, China (2010.12.18-2010.12.21)] 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Metabolomic profiling for biomarker discovery in pancreatic cancer

Kaur, Prabhjit, Sheikh, Kathryn, Kirilyuk, Alexander, Kirilyuk, Ksenia, Ressom, Habtom W., Cheema, Amrita K, Kallakury, Bhaskar

Year:

2010

Language:

english

File:

PDF, 569 KB

english, 2010

28

[IEEE 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Hong Kong, China (2010.12.18-2010.12.21)] 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - A new method for alignment of LC-MALDI-TOF data

Tang, Zhiqun, Zhang, Lihua, Amrita, K. Cheema, Habtom, W. Ressom

Year:

2010

Language:

english

File:

PDF, 460 KB

english, 2010

29

Functional Proteomics Analysis to Study ATM Dependent Signaling in Response to Ionizing Radiation

Cheema, Amrita K., Varghese, Rency S., Timofeeva, Olga, Zhang, Lihua, Kirilyuk, Alexander, Zandkarimi, Fereshteh, Kaur, Prabhjit, Ressom, Habtom W., Jung, Mira, Dritschilo, Anatoly

Journal:

Radiation Research

Year:

2013

Language:

english

File:

PDF, 1.41 MB

english, 2013

30

Preclinical Studies of the Potent and Selective Nicotinic α4β2 Receptor Ligand VMY-2-95

Kong, Hyesik, Song, Jun-ke, Yenugonda, Venkata Mahidhar, Zhang, Li, Shuo, Tian, Cheema, Amrita K., Kong, Yali, Du, Guan-hua, Brown, Milton L.

Journal:

Molecular Pharmaceutics

Year:

2015

Language:

english

File:

PDF, 1.22 MB

english, 2015

31

Mechanisms of Unphosphorylated STAT3 Transcription Factor Binding to DNA

Timofeeva, Olga A., Chasovskikh, Sergey, Lonskaya, Irina, Tarasova, Nadya I., Khavrutskii, Lyuba, Tarasov, Sergey G., Zhang, Xueping, Korostyshevskiy, Valeriy R., Cheema, Amrita, Zhang, Lihua, Dakshan

Journal:

Journal of Biological Chemistry

Year:

2012

Language:

english

File:

PDF, 1.47 MB

english, 2012

32

Acetylation Increases EWS-FLI1 DNA Binding and Transcriptional Activity

Schlottmann, Silke, Erkizan, Hayriye V., Barber-Rotenberg, Julie S., Knights, Chad, Cheema, Amrita, Üren, Aykut, Avantaggiati, Maria L., Toretsky, Jeffrey A.

Journal:

Frontiers in Oncology

Year:

2012

Language:

english

File:

PDF, 1.28 MB

english, 2012

33

Radiation metabolomics and its potential in biodosimetry

Coy, Stephen L., Cheema, Amrita K., Tyburski, John B., Laiakis, Evagelia C., Collins, Sean P., Fornace, Albert J.

Journal:

International Journal of Radiation Biology

Year:

2011

Language:

english

File:

PDF, 1.75 MB

english, 2011

34

Identification of novel cell survival regulation in diabetic embryopathy via phospholipidomic profiling

Cao, Lixue, Liu, Peiyan, Gill, Kirandeep, Reece, E.A., Cheema, Amrita K., Zhao, Zhiyong

Journal:

Biochemical and Biophysical Research Communications

Year:

2016

Language:

english

File:

PDF, 1013 KB

english, 2016

35

Metabolomic profiles of current cigarette smokers

Hsu, Ping-Ching, Lan, Renny S., Brasky, Theodore M., Marian, Catalin, Cheema, Amrita K., Ressom, Habtom W., Loffredo, Christopher A., Pickworth, Wallace B., Shields, Peter G.

Journal:

Molecular Carcinogenesis

Year:

2016

Language:

english

File:

PDF, 1.35 MB

english, 2016

36

Metabolomic profiling of breast tumors using ductal fluid

Matos Do Canto, Luisa, Marian, Catalin, Varghese, Rency, Ahn, Jaeil, Da Cunha, Patricia, Willey, Shawna, Sidawy, Mary, Rone, Janice, Cheema, Amrita, Luta, George, Nezami Ranjbar, Mohammad, Ressom, Hab

Journal:

International Journal of Oncology

Year:

2016

Language:

english

File:

PDF, 515 KB

english, 2016

37

What Success Can Teach Us About Failure: The Plasma Metabolome of Older Adults with Superior Memory and Lessons for Alzheimer’s Disease

Mapstone, Mark, Lin, Feng, Nalls, Mike A., Cheema, Amrita K., Singleton, Andrew B., Fiandaca, Massimo S., Federoff, Howard J.

Journal:

Neurobiology of Aging

Year:

2016

Language:

english

File:

PDF, 1.01 MB

english, 2016

38

Biomarker validation: Methods and matrix matter

Mapstone, Mark, Cheema, Amrita K., Zhong, Xiaogang, Fiandaca, Massimo S., Federoff, Howard J.

Journal:

Alzheimer's & Dementia

Year:

2016

Language:

english

File:

PDF, 232 KB

english, 2016

39

Menthol Smokers: Metabolomic Profiling and Smoking Behavior

Hsu, Ping-Ching, Lan, Renny S., Brasky, Theodore M., Marian, Catalin, Cheema, Amrita K., Ressom, Habtom W., Loffredo, Christopher A., Pickworth, Wallace B., Shields, Peter G.

Journal:

Cancer Epidemiology Biomarkers & Prevention

Year:

2017

Language:

english

File:

PDF, 741 KB

english, 2017

40

A new sub‐pathway of long‐patch base excision repair involving 5′ gap formation

Woodrick, Jordan, Gupta, Suhani, Camacho, Sharon, Parvathaneni, Swetha, Choudhury, Sujata, Cheema, Amrita, Bai, Yi, Khatkar, Pooja, Erkizan, Hayriye Verda, Sami, Furqan, Su, Yan, Schärer, Orlando D, S

Journal:

The EMBO Journal

Year:

2017

Language:

english

File:

PDF, 2.48 MB

english, 2017

41

One-carbon metabolism and ionizing radiation: a multifaceted interaction

Miousse, Isabelle R., Tobacyk, Julia, Melnyk, Stepan, James, S. Jill, Cheema, Amrita K., Boerma, Marjan, Hauer-Jensen, Martin, Koturbash, Igor

Journal:

BioMolecular Concepts

Language:

english

File:

PDF, 215 KB

english

42

A phase I study of intravenous artesunate in patients with advanced solid tumor malignancies

Deeken, John F., Wang, Hongkun, Hartley, Marion, Cheema, Amrita K., Smaglo, Brandon, Hwang, Jimmy J., He, Aiwu Ruth, Weiner, Louis M., Marshall, John L., Giaccone, Giuseppe, Liu, Stephen, Luecht, Jim,

Journal:

Cancer Chemotherapy and Pharmacology

Year:

2018

Language:

english

File:

PDF, 993 KB

english, 2018

43

Space-type radiation induces multimodal responses in the mouse gut microbiome and metabolome

Casero, David, Gill, Kirandeep, Sridharan, Vijayalakshmi, Koturbash, Igor, Nelson, Gregory, Hauer-Jensen, Martin, Boerma, Marjan, Braun, Jonathan, Cheema, Amrita K.

Journal:

Year:

2017

Language:

english

File:

PDF, 3.27 MB

english, 2017

44

SID-MRM-MS enabled verification of biomarkers of type 2 diabetes in a Qatari population

Kaur, Prabhjit, Rizk, Nasser M, Younes, Noura, Zirie, Mahmoud, Cheema, Amrita K

Journal:

Qatar Foundation Annual Research Forum Proceedings

Year:

2012

Language:

english

File:

PDF, 122 KB

english, 2012

45

Discovery of Metabolic Biomarkers for Duchenne Muscular Dystrophy within a Natural History Study

Boca, Simina M., Nishida, Maki, Harris, Michael, Rao, Shruti, Cheema, Amrita K., Gill, Kirandeep, Seol, Haeri, Morgenroth, Lauren P., Henricson, Erik, McDonald, Craig, Mah, Jean K., Clemens, Paula R.,

Journal:

Year:

2016

Language:

english

File:

PDF, 1.43 MB

english, 2016

46

Correction: Discovery of Metabolic Biomarkers for Duchenne Muscular Dystrophy within a Natural History Study

Boca, Simina M., Nishida, Maki, Harris, Michael, Rao, Shruti, Cheema, Amrita K., Gill, Kirandeep, Wang, Difei, An, Lin, Gauba, Robinder, Seol, Haeri, Morgenroth, Lauren P., Henricson, Erik, McDonald,

Journal:

Year:

2016

Language:

english

File:

PDF, 93 KB

english, 2016

47

Plasma metabolomic biomarkers accurately classify acute mild traumatic brain injury from controls

Fiandaca, Massimo S., Mapstone, Mark, Mahmoodi, Amin, Gross, Thomas, Macciardi, Fabio, Cheema, Amrita K., Merchant-Borna, Kian, Bazarian, Jeffrey, Federoff, Howard J., Miller, Mark Webber

Journal:

Year:

2018

Language:

english

File:

PDF, 1.27 MB

english, 2018

48

Small Changes Huge Impact: The Role of Protein Posttranslational Modifications in Cellular Homeostasis and Disease

Karve, Tejaswita M., Cheema, Amrita K.

Journal:

Journal of Amino Acids

Year:

2011

Language:

english

File:

PDF, 1.18 MB

english, 2011

49

Modulation of Radiation Response by the Tetrahydrobiopterin Pathway

Pathak, Rupak, Cheema, Amrita, Boca, Simina, Krager, Kimberly, Hauer-Jensen, Martin, Aykin-Burns, Nukhet

Journal:

Year:

2015

Language:

english

File:

PDF, 192 KB

english, 2015

50

A Metabolomic and Lipidomic Serum Signature from Nonhuman Primates Administered with a Promising Radiation Countermeasure, Gamma-Tocotrienol

Cheema, Amrita, Mehta, Khyati, Fatanmi, Oluseyi, Wise, Stephen, Hinzman, Charles, Wolff, Josh, Singh, Vijay

Journal:

International Journal of Molecular Sciences

Year:

2017

Language:

english

File:

PDF, 19.23 MB

english, 2017

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